Information for 19-AATTATATATTTC (Motif 50)

C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C
Reverse Opposite:
C A T G C G T A C G T A C G T A A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.981e+00
Information Content per bp:1.938
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 43.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATTATATATTTC--
NANTTATATATAANGN
 A C G T C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AATTATATATTTC
AAATTAATTAATC-
 A C G T C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATTATATATTTC-----
NTAATTDGCYAATTANNWWD
 A C G T A C G T C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATTATATATTTC
TGAATTATGCAT---
 A C G T A C G T C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AATTATATATTTC
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATTATATATTTC--
-ANTATCGATTTTTN
 C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C A C G T A C G T
A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATTATATATTTC--
-ATTATCGATTTTTT
 C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C A C G T A C G T
A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PH0142.1_Pou1f1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATTATATATTTC
GATTAATTAATTAAGTC
 A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATTATATATTTC--
-NTTATTGATTTTTT
 C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATTATATATTTC
GAATGTTTGTTT-
 C G T A C G T A C G A T A C G T C G T A A C G T C G T A A C G T C G T A C G A T A C G T A C G T G T A C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T