Information for 13-AAGCTATGTC (Motif 46)

C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A C G T C T G A A C T G G T A C A C G T A C G T
p-value:1e-6
log p-value:-1.585e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.4 +/- 17.5bp
Average Position of motif in Background60.2 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGCTATGTC
AACATATGTC
 C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAGCTATGTC--
-----NTGTCAN
 C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGCTATGTC--
TATAAGTAGGTCAA
 A C G T A C G T C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGCTATGTC-
AGGGAAGTCATTTCT
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAGCTATGTC
---CTTTGT-
 C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCTATGTC-
-AAYTAGGTCA
 C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGCTATGTC
CAAGCTT----
 A C G T C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AAGCTATGTC----
------TGTCANYT
 C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAGCTATGTC--
--CCWTTGTYYB
 C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAGCTATGTC--
----CCTGTCAA
 C G T A C G T A A C T G A G T C A G C T C G T A A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A