Information for 14-CTGTSWCGSGCAS (Motif 43)

A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
Reverse Opposite:
A T G C A C G T A C T G A T G C A T C G A G T C A T C G G C A T A T G C C G T A A G T C C G T A A T C G
p-value:1e-7
log p-value:-1.743e+01
Information Content per bp:1.743
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif169.6
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets51.3 +/- 27.7bp
Average Position of motif in Background49.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGTSWCGSGCAS
GCTGTG--------
 A C G T A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTSWCGSGCAS
GCTGTCAA------
 A C G T A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTSWCGSGCAS
CCTGTCAA------
 A C G T A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGTSWCGSGCAS
NTGTCAN------
 A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGTSWCGSGCAS
VGCTGWCAVB-----
 A C G T A C G T A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGTSWCGSGCAS
CTGTTCCTGG---
 A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGTSWCGSGCAS
---TBGCACGCAA
 A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGTSWCGSGCAS-----
----GCCGCGCAGTGCGT
 A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGTSWCGSGCAS
CTGTCTGG-----
 A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGTSWCGSGCAS----
-TGGCGCGCGCGCCTGA
 A T G C A C G T A C T G C G A T A T C G C G T A A T G C C T A G A T G C A T C G G T A C G T C A A T C G A C G T A C G T A C G T A C G T
A C G T C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A