Information for 20-AGGGGAACTCCCCTGT (Motif 38)

T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
Reverse Opposite:
T C G A A T G C G C T A A T C G A C T G A C T G A T C G T C G A C T A G G C A T C G A T T G A C A G T C A T G C A G T C A C G T
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.727
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.1 +/- 17.8bp
Average Position of motif in Background59.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB2/MA0778.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGGGAACTCCCCTGT
AGGGGAATCCCCT---
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGGGAACTCCCCTGT
NGGGGATTTCCC----
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGGGAACTCCCCTGT
-GGGGATTCCCCC---
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGGGAACTCCCCTGT
AGGGGAATCCCCT---
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGGGAACTCCCCTGT
-GGGGATTTCC-----
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGGGAACTCCCCTGT
NNNNGGTACCCCCCANN
 A C G T T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGGGGAACTCCCCTGT
------CCTCACCTG-
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGGAACTCCCCTGT
-GGGGATTTCC-----
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGGGAACTCCCCTGT
--GGAAATTCCC----
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGGGAACTCCCCTGT
TGGGGA----------
 T G C A A C T G A T C G A C T G A C T G G C T A C G T A A G T C A G C T A T G C G T A C G T A C A T G C C G A T A T C G A G C T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T