Information for 18-CAGTGGGCCTAATGTC (Motif 36)

A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G G T C A G T A C C G T A A C G T A C G T C G T A A C T G A C T G A T G C G T A C A G T C C T G A A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.8 +/- 11.4bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGTGGGCCTAATGTC
-ACCGTGACTAATTNN
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGTGGGCCTAATGTC
ARGAGGMCAAAATGW-
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGTGGGCCTAATGTC
--GTGGGCCCCA----
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C
A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGTGGGCCTAATGTC--
----CCGCCCAAGGGCAG
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGTGGGCCTAATGTC-
---TGGGGCAAAGGTCA
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CAGTGGGCCTAATGTC
--------NTAATTGN
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CAGTGGGCCTAATGTC-
-------NNTAATTANN
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CAGTGGGCCTAATGTC
--------CTAATKGV
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAGTGGGCCTAATGTC
CGAACAGTGCTCACTAT---
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAGTGGGCCTAATGTC-
--GTAGGGCAAAGGTCA
 A G T C C G T A A C T G A G C T C T A G A C T G A T C G G T A C A G T C C G A T G T C A C G T A A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A