Information for 9-CCCGGCAGGT (Motif 30)

A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T
Reverse Opposite:
C T G A A T G C G T A C A C G T A T C G A T G C G T A C A C T G A C T G A T C G
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.834
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif305.9
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets55.3 +/- 27.0bp
Average Position of motif in Background51.2 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCCGGCAGGT----
--SDGCAGGTGCNS
 A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGCAGGT----
DCHCAGCAGGRGGCC
 A C G T A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCCGGCAGGT--
---AACAGGTGT
 A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCGGCAGGT--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCGGCAGGT--
CACAGCAGGGGG
 A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCCGGCAGGT----
----VCAGGTRDRY
 A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCCGGCAGGT--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCCGGCAGGT---
---NNCAGGTGNN
 A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCGGCAGGT---
---GACAGGTGTN
 A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGCAGGT
DCTCAGCAGG-
 A C G T A T G C A G T C A G T C C A T G T A C G A T G C T C G A A C T G A T C G G A C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T