Information for 13-CGGGGGCAGGCACTTT (Motif 21)

A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A A C T G C G A T A C T G A T G C A G T C A C G T A T C G G T A C A G T C A G T C A G T C A G T C C T A G
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets74.0 +/- 12.1bp
Average Position of motif in Background52.3 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGCAGGCACTTT
ANTGCGGGGGCGGN------
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CGGGGGCAGGCACTTT-
-------AAGCACTTAA
 A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGGGGGCAGGCACTTT-
--AGGGAAGTCATTTCT
 A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CGGGGGCAGGCACTTT-
-------MRSCACTYAA
 A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGGGGGCAGGCACTTT
AAGGKGRCGCAGGCA----
 A C G T A C G T A C G T A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.52
Offset:9
Orientation:forward strand
Alignment:CGGGGGCAGGCACTTT-
---------GCACTTAA
 A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGGCAGGCACTTT
GGCGGGGGCGGGGG----
 A C G T A C G T A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGCAGGCACTTT
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGGGGGCAGGCACTTT
--TGCGCAGGCGC---
 A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CGGGGGCAGGCACTTT-
--------ACCACTTAA
 A G T C A C T G C T A G A C T G C T A G A C T G A T G C C G T A A C T G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A