Information for 4-CGTTAGCTGG (Motif 17)

A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G
Reverse Opposite:
A G T C A G T C C G T A A C T G A G T C A C G T C G T A C G T A G T A C A C T G
p-value:1e-10
log p-value:-2.373e+01
Information Content per bp:1.866
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif49.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.2 +/- 22.6bp
Average Position of motif in Background48.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGTTAGCTGG--
--HCAGCTGDTN
 A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CGTTAGCTGG
----NGCTN-
 A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTAGCTGG
YSTTATCT--
 A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTTAGCTGG
NCCTTATCTG-
 A C G T A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTTAGCTGG-
-ATCAGCTGTT
 A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G A C G T
A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGTTAGCTGG
NNCTTATCTN-
 A C G T A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGTTAGCTGG
CAGCAGCTGN
 A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGTTAGCTGG
NAACAGCTGG
 A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGTTAGCTGG-
---CAGCTGNT
 A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGTTAGCTGG----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A G T C C A T G A C G T G C A T C G T A A C T G A G T C A C G T C T A G C T A G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T