Information for 9-GAAGGGGVTAHAGDAA (Motif 15)

C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
Reverse Opposite:
A C G T A G C T G C T A A T G C A C G T C A T G A G C T C G T A A T G C A G T C A G T C A G T C A G T C A C G T A G C T A G T C
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.755
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 24.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAGGGGVTAHAGDAA
GGAGGGGGAA------
 C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGGGGVTAHAGDAA
-AAGGKGRCGCAGGCA
 C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAGGGGVTAHAGDAA
GCTGGGGGGTACCCCTT
 A C G T C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAAGGGGVTAHAGDAA
-AAGGTGTGAAA----
 C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAAGGGGVTAHAGDAA
TTAAGGGGATTAACTAC
 A C G T C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGGGGVTAHAGDAA
NATNGGGNGGGGANAN-----
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAAGGGGVTAHAGDAA-----
GGAGGAGGAGGGGGAGGAGGA
 C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAAGGGGVTAHAGDAA
GGCGAGGGGTCAAGGGC-
 A C G T A C G T C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAAGGGGVTAHAGDAA
-AAGGTGTKAA-----
 C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAAGGGGVTAHAGDAA
--TGGGGA--------
 C T A G C T G A C G T A A C T G A C T G C T A G A C T G T A C G C G A T C T G A G A T C C G T A T A C G C G A T C T G A C G T A
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T