Information for 17-CTRGTCCYTG (Motif 22)

A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G
Reverse Opposite:
G T A C C T G A C T G A A C T G A C T G C T G A A T G C G A T C T C G A A C T G
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.714
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.56%
Number of Background Sequences with motif743.4
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets49.2 +/- 26.0bp
Average Position of motif in Background49.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTRGTCCYTG
BNTGDCCTTG
 A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CTRGTCCYTG-
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTRGTCCYTG
CTAGGCCT--
 A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTRGTCCYTG--
--TGACCTTGAN
 A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTRGTCCYTG
TKCTGTTCCA--
 A C G T A C G T A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTRGTCCYTG--
--TGACCTTGAV
 A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTRGTCCYTG
CNAGGCCT--
 A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTRGTCCYTG-----
GCTGACCTTGAACTN
 A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTRGTCCYTG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTRGTCCYTG
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T A G A T C G G A C T A G T C A G T C G A C T G A C T C A T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T