Information for 2-GACCTCTGGCCYAGAT (Motif 2)

T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
Reverse Opposite:
G C T A C G A T A G T C G A C T T C A G C A T G A T C G A G T C G A T C C T G A T C A G C G T A A C T G C A T G C A G T A T G C
p-value:1e-25
log p-value:-5.846e+01
Information Content per bp:1.583
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.83%
Number of Background Sequences with motif586.5
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets48.6 +/- 24.7bp
Average Position of motif in Background49.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGCCCTAN--
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGCCCCA---
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGCCCTA---
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTCTGACCCCN--
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGACCTC---
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGACCTN---
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGACCCC---
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGACCCC---
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGACCTTTGACCCC---
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCTGGCCYAGAT
TGGACTTTGNNCTCN--
 A C G T T A C G G T C A G T A C A G T C G C A T A G T C A G C T C A T G T C A G T A G C G T A C A G T C C T G A C T A G G C T A C G A T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T