Information for 14-GAAGCCAGGA (Motif 20)

A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A
Reverse Opposite:
C G A T A G T C G T A C A G C T A C T G A T C G A G T C C G A T A C G T T A G C
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.843
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif434.4
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets46.3 +/- 23.0bp
Average Position of motif in Background49.3 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCAGGA
NGAAGC-----
 A C G T A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAAGCCAGGA---
---ANCAGGATGT
 A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAGCCAGGA
CGTGCCAAG-
 A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAAGCCAGGA
--TGCCAA--
 A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAGCCAGGA-
-ATGCCAGACN
 A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAGCCAGGA
-CAGCC----
 A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAGCCAGGA-----
---NDCAGGAARTNN
 A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAAGCCAGGA----
----ACAGGAAGTG
 A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAAGCCAGGA--
NNNGTAACTANGNNA
 A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCCAGGA---
GGAAGGAAGGAAGGAAGG
 A C G T A C G T A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T G C G T A C C T G A C A T G C T A G C G T A A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G