Information for 7-CTTTTATTTCAAAATA (Motif 11)

A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
Reverse Opposite:
A C G T G T C A G C A T A G C T A C G T C A G T A T C G C T G A C G T A C G T A G C A T C G T A T G C A T C G A C G T A T A C G
p-value:1e-12
log p-value:-2.782e+01
Information Content per bp:1.653
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif99.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets53.2 +/- 27.2bp
Average Position of motif in Background50.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTTTTATTTCAAAATA
-----ATTGCACAATA
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTATTTCAAAATA
NNNNTTTTTTTTTNAAC--
 A C G T A C G T A C G T A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTTTATTTCAAAATA
--NNTTTTTCTTATNT
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTTTTATTTCAAAATA
--AATATTAATAAAGA
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTATTTCAAAATA
NNTTTTGTTTTGATNT-
 A C G T A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTTTTATTTCAAAATA
-----NATTCAAAT--
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTTTTATTTCAAAATA
-CCGTATTATAAACAA
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTTTTATTTCAAAATA
------TTTGAAACCG
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTTTATTTCAAAATA
-TTTTTTTTCNNGTN-
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTTTATTTCAAAATA
CATTGTTATGCAAAT-
 A G T C G C A T A C G T A C G T G A C T C G T A C G A T A C G T A G C T T A G C G T C A C G T A T C G A C G T A C A G T G T C A
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T