Information for 4-WARCCYGGSKGSCRGC (Motif 5)

C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A T C G A G T C G T C A A T C G A G T C A G T C C T A G A C T G A C T G A G T C A C G T C G A T
p-value:1e-13
log p-value:-3.105e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.3 +/- 10.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:WARCCYGGSKGSCRGC--
----CTGGCAGNCTGCCA
 C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WARCCYGGSKGSCRGC
-TGCCCTGAGGGCA--
 C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:WARCCYGGSKGSCRGC
-TGCCCNNAGGGCA--
 C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WARCCYGGSKGSCRGC
-TGCCCTGAGGGCA--
 C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:WARCCYGGSKGSCRGC---
---CTTGGCANNNTGCCAA
 C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--WARCCYGGSKGSCRGC
GCACCCCTGGGTGCC---
 A C G T A C G T C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:WARCCYGGSKGSCRGC
-TGCCCNGGGGCA---
 C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--WARCCYGGSKGSCRGC
ACCCCCCCGGGGGGN---
 A C G T A C G T C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--WARCCYGGSKGSCRGC
NCCCCCCCGGGGGGN---
 A C G T A C G T C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:WARCCYGGSKGSCRGC-
-------VBTGWCAGCB
 C G T A C G T A C T A G A G T C A G T C G A T C A C T G A C T G A T G C A C G T A C T G T A C G A G T C C T A G T A C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C