p-value: | 1e-7 |
log p-value: | -1.798e+01 |
Information Content per bp: | 1.662 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.73% |
Number of Background Sequences with motif | 9.1 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 56.3 +/- 16.6bp |
Average Position of motif in Background | 48.5 +/- 27.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTWCTTCAC TGACCTARTT--- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTWCTTCAC TTGACCTANTTATN |
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RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTWCTTCAC TGACCTTGAT--- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTWCTTCAC GTGACCTT------ |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTWCTTCAC TGACCT------- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTWCTTCAC TGACCTYA----- |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTWCTTCAC ATGACCTTGA---- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGACCTWCTTCAC NTGACCTTGA---- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTWCTTCAC TGACCYCT----- |
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PB0200.1_Zfp187_2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGACCTWCTTCAC-- GAGCCCTTGTCCCTAA |
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