Information for 6-GCGACCTCTG (Motif 8)

A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A C T A G C T G A A C T G A C T G A C G T A G T C T A C G A G T C
p-value:1e-12
log p-value:-2.836e+01
Information Content per bp:1.843
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif106.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets53.6 +/- 23.9bp
Average Position of motif in Background49.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GCGACCTCTG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCGACCTCTG---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCGACCTCTG
CTGACCTTTG
 A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCGACCTCTG
CNNTTGACCTTTG
 A C G T A C G T A C G T A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCGACCTCTG
-TGACCYCT-
 A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCGACCTCTG------
-TGACCTCTGACCCCN
 A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCGACCTCTG-----
-TGACCTTTGCCCTA
 A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCGACCTCTG
GTGACCTT--
 A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCGACCTCTG------
-TGACCTTTGCCCTAN
 A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCGACCTCTG-----
-TGACCTTTGCCCCA
 A C T G A T G C A C T G G T C A A G T C A G T C A G C T A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A