| p-value: | 1e-8 |
| log p-value: | -2.002e+01 |
| Information Content per bp: | 1.539 |
| Number of Target Sequences with motif | 17.0 |
| Percentage of Target Sequences with motif | 1.87% |
| Number of Background Sequences with motif | 137.8 |
| Percentage of Background Sequences with motif | 0.28% |
| Average Position of motif in Targets | 41.6 +/- 19.3bp |
| Average Position of motif in Background | 53.6 +/- 28.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Rfx1/MA0509.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.85
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GTTGCCATGG----
GTTGCCATGGNAAC |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 2 |
| Score: | 0.83
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GTTGCCATGG---
NGTTGCCATGGCAA |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.81
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTTGCCATGG--
NNCGTTGCTATGGNN |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 4 |
| Score: | 0.81
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GTTGCCATGG---
GGTTGCCATGGCAA |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 5 |
| Score: | 0.78
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GTTGCCATGG
CTGTTGCTAGGS |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 6 |
| Score: | 0.78
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GTTGCCATGG-----
GTTGCCATGGCAACM |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 7 |
| Score: | 0.77
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GTTGCCATGG----
CGGTTGCCATGGCAAC |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.76
| | Offset: | -7
| | Orientation: | reverse strand |
| Alignment: | -------GTTGCCATGG------
NTNNNNNGTTGCTANGGNNCANA |
|
|
|
RFX3/MA0798.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.75
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GTTGCCATGG-----
CGTTGCCATGGCAACG |
|
|
|
RFX2/MA0600.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.75
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GTTGCCATGG-----
CGTTGCCATGGCAACG |
|
|
|
