Information for 10-CCTTTCTTCC (Motif 18)

A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C
Reverse Opposite:
T C A G T A C G T C G A T G C A T C A G T C G A C T G A C T G A C T A G T A C G
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.647
Number of Target Sequences with motif179.0
Percentage of Target Sequences with motif19.69%
Number of Background Sequences with motif5963.2
Percentage of Background Sequences with motif12.27%
Average Position of motif in Targets53.2 +/- 25.0bp
Average Position of motif in Background50.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCTTTCTTCC
YCTTTGTTCC
 A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTCTTCC
NNGCACCTTTCTCC-
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCTTTCTTCC
CCTTTGTTTT
 A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTCTTCC---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTCTTCC---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTTTCTTCC
NCCATTGTTC-
 A C G T A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:7
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------CCTTTCTTCC
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTTTCTTCC-------
-CCGTCTTCCCCCTCAC
 A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTCTTCC
CCTTTGTT--
 A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTTTCTTCC-----
--TTACTTCCTNGTN
 A T G C G A T C G A C T G A C T A G C T A G T C A C G T A G C T A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T