Information for 12-ACTCTTGACCTAA (Motif 15)

C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A
Reverse Opposite:
A C G T A G C T C G T A C T A G A T C G A G C T A G T C C G T A C T G A C T A G C G T A A C T G C G A T
p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.805
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif32.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets41.2 +/- 22.8bp
Average Position of motif in Background49.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACTCTTGACCTAA-
-CNNTTGACCTTTG
 C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ACTCTTGACCTAA-----
----TTGACCTANTTATN
 C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ACTCTTGACCTAA--
-----TGACCTARTT
 C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ACTCTTGACCTAA
-----TGACCT--
 C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACTCTTGACCTAA
TGACCTTTTGACCTC-
 A C G T A C G T A C G T C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ACTCTTGACCTAA
-----TGACCTYA
 C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ACTCTTGACCTAA--
-----TGACCTTGAT
 C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ACTCTTGACCTAA
TTGACCTTTTGACCTT-
 A C G T A C G T A C G T A C G T C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACTCTTGACCTAA
TGACCTTTTGACCTTT
 A C G T A C G T A C G T C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Mitf/MA0620.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTCTTGACCTAA
NCACGTGACN---
 C G T A A G T C C G A T A G T C A G C T A C G T C T A G C T G A A T G C A G T C C G A T C T G A T C G A
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T