Information for 8-AGGCACYACC (Motif 10)

C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C
Reverse Opposite:
C T A G A T C G C G A T T C A G A T C G G C A T A C T G G T A C A T G C G C A T
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.570
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif126.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets63.3 +/- 27.2bp
Average Position of motif in Background47.3 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGGCACYACC-----
NNGGCGACACCTCNNN
 A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACYACC
BCAGACWA----
 A C G T A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACYACC
CCAGACAG----
 A C G T A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGCACYACC-----
NRGCCCCRCCCHBNN
 C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C A C G T A C G T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AGGCACYACC
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACYACC
SCTGTCARCACC
 A C G T A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACYACC
TGAGTCAGCA--
 A C G T A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACYACC
CCAGACRSVB--
 A C G T A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGCACYACC---
CAGGCCNNGGCCNN
 A C G T C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGCACYACC---
-GGCCACRCCCMK
 C G T A T A C G C A T G T G A C C G T A T A G C A G T C G C T A T A G C G A T C A C G T A C G T A C G T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G