Information for 7-CCTACAGTGG (Motif 9)

A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G
Reverse Opposite:
G A T C A G T C G T C A G T A C A C G T A C T G C G A T C G T A T A C G C T A G
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.835
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif58.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets58.8 +/- 21.9bp
Average Position of motif in Background56.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTACAGTGG----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTACAGTGG-
-BTBRAGTGSN
 A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTACAGTGG-
-CTYRAGTGSY
 A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTACAGTGG-
-NTCAAGTGGN
 A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTACAGTGG--
--TTRAGTGSYK
 A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTACAGTGG
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTACAGTGG-----
ATGTACAGTAGCAAAG
 A C G T A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTACAGTGG-----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTACAGTGG
-NTCAAGTGG
 A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTACAGTGG-----
NNTNNACAATGGGANNN
 A C G T A C G T A G T C A T G C G C A T G C T A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A