Information for 4-GAGAYCTTGGDGATTY (Motif 4)

C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
Reverse Opposite:
C T G A C G T A C G T A A C G T A T G C G A C T G A T C A G T C C G T A C G T A A T C G C T A G A C G T A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.703e+01
Information Content per bp:1.741
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 21.6bp
Average Position of motif in Background41.4 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGAYCTTGGDGATTY
-TGACCTTGAN-----
 C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGAYCTTGGDGATTY
-TGACCTTGAV-----
 C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GAGAYCTTGGDGATTY
NNNNATGACCTTGANTN---
 A C G T A C G T A C G T A C G T C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGAYCTTGGDGATTY
NTGACCTTGA------
 C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAGAYCTTGGDGATTY--
-------TGTGGATTNNN
 C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGAYCTTGGDGATTY
BNTGDCCTTG-------
 A C G T C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGAYCTTGGDGATTY
NATGACCTTGA------
 A C G T C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGAYCTTGGDGATTY
GCTGACCTTGAACTN--
 A C G T C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGAYCTTGGDGATTY
ATGACCTTGA------
 C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAGAYCTTGGDGATTY-
-----NNTGTGGATTSS
 C T A G C G T A A C T G T G C A A G T C A T G C C G A T A C G T A C T G C T A G C G T A T A C G G T C A C G A T C G A T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G