Information for 11-TGGGAGKTGTAGT (Motif 11)

A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T
Reverse Opposite:
G T C A A G T C A G C T G T C A G T A C C G T A G T A C G A T C C G A T A G T C A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.114e+01
Information Content per bp:1.791
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif98.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets41.1 +/- 20.8bp
Average Position of motif in Background51.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:TGGGAGKTGTAGT
-GGGAATTGTAGT
 A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAGKTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.83
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAGKTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGAGKTGTAGT---
GCGGAGGTGTCGCCTC
 A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGGAGKTGTAGT---
----NNHTGTGGTTWN
 A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGGGAGKTGTAGT--
-----GCTGTGGTTT
 A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAGKTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGGGAGKTGTAGT---
------CTGTGGTTTN
 A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGGGAGKTGTAGT--
-----NNTGTGGTTT
 A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGGGAGKTGTAGT
TATTATGGGATGGATAA-
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G C T A G C G T A C T A G C A T G A C G T A C T G A C G T C T G A A C T G A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T