Information for 9-AGTACATAAA (Motif 10)

C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A
Reverse Opposite:
A C G T A G C T A C G T T C G A A G C T A T C G A G C T C G T A A T G C A C G T
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.835
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif105.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets53.6 +/- 29.2bp
Average Position of motif in Background46.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----AGTACATAAA--
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

NFIL3/MA0025.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AGTACATAAA
ANGTTACATAA-
 A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGTACATAAA---
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AGTACATAAA
TTATTAGTACATAN-
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AGTACATAAA-
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AGTACATAAA--
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

TEF/MA0843.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTACATAAA-
TATTACGTAACA
 A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGTACATAAA---
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGTACATAAA---
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGTACATAAA---
CGAAGCACACAAAATA
 A C G T A C G T A C G T C G T A T A C G C G A T C T G A T A G C C T G A A G C T C G T A C T G A T C G A A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A