Information for 9-TTGCAACCAACTG (Motif 9)

A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G
Reverse Opposite:
A G T C C T G A A C T G A C G T A C G T A C T G A C T G A C G T A C G T C A T G A G T C C G T A C G T A
p-value:1e-10
log p-value:-2.480e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 22.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTGCAACCAACTG-----
---CGACCAACTGCCGTG
 A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTGCAACCAACTG------
---CGACCAACTGCCATGC
 A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TTGCAACCAACTG---
------CCAACTGCCA
 A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTGCAACCAACTG
TACCATAGCAACGGT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTGCAACCAACTG
CCGCATAGCAACGGA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------TTGCAACCAACTG-
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTGCAACCAACTG--
-----ACCATCTGTT
 A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTGCAACCAACTG--
-----GCCATCTGTT
 A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGCAACCAACTG--
---CGACCATCTGTT
 A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G A C G T A C G T
A C G T A C G T A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTGCAACCAACTG
----NANANAC--
 A C G T C G A T A C T G G A T C C G T A C G T A A G T C A G T C C G T A C G T A A G T C A G C T C T A G
A C G T A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T