Information for 12-CTCAGACCCAGTC (Motif 16)

G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C
Reverse Opposite:
A T C G G T C A G T A C C G A T A C T G A C T G A C T G A G C T A G T C C G A T A C T G C T G A A C T G
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.860
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.6 +/- 22.2bp
Average Position of motif in Background41.3 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGACCCAGTC--
NNNNTGACCCGGCGCG
 A C G T G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGACCCAGTC
GGCCACACCCAN--
 A C G T G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCAGACCCAGTC------
---TGACCCAGTGACCTAC
 G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCAGACCCAGTC
GGCCACACCCA---
 A C G T G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCAGACCCAGTC
---TGACCT----
 G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCAGACCCAGTC
GCCACACCCA---
 G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGACCCAGTC--
NNCNTGACCCCGCTCT
 A C G T G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCAGACCCAGTC
---TGACCTARTT
 G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCAGACCCAGTC
--AAGACCCYYN-
 G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCAGACCCAGTC-----
--GAGCCCTTGTCCCTAA
 G T A C A G C T A G T C C G T A A C T G C T G A A G T C A G T C A G T C C G T A A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G