Information for 6-CTTCCAATAA (Motif 11)

A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A
Reverse Opposite:
A C G T C G A T G C T A C A G T C G A T C T A G A C T G G C T A C T G A A C T G
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.829
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif112.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets61.7 +/- 19.9bp
Average Position of motif in Background50.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTCCAATAA
ATTTCCAAGAA
 A C G T A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTTCCAATAA---
---CCAATAAAAC
 A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTTCCAATAA-
TTTCCCAGAAN
 A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTTCCAATAA---
---CCAATAAAAA
 A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTTCCAATAA------
CTACCAATAAAATTCT
 A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTCCAATAA
GCTTCC-----
 A C G T A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTTCCAATAA--
NNCTTCCNGGAAGN
 A C G T A C G T A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTCCAATAA--
TTTCCNGGAAAN
 A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T A C G T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCAATAA---
ATTTCCNGGAAATN
 A C G T A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T A C G T A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCAATAA-
NNNTTTCCTGGAAA
 A C G T A C G T A C G T A G T C A G C T C G A T A G T C G A T C C G T A G T C A C G A T C G T A T G C A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A