Information for 14-AGGMATTAACCCC (Motif 16)

C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C A T G C A T G A G C T A C G T G T C A G T C A A C G T A C T G G T A C G T A C C G A T
p-value:1e-12
log p-value:-2.933e+01
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.4 +/- 31.8bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGMATTAACCCC----
NNNAATTAATCCCCNCN
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGMATTAACCCC----
NANANTTAATCCCNNNN
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:AGGMATTAACCCC-
------TAATCCCN
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AGGMATTAACCCC
----CTTAATCCC
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGMATTAACCCC----
GANNATTAATCCCTNNN
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGMATTAACCCC----
GNNNATTAATCCCTNCN
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGGMATTAACCCC
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGGMATTAACCCC
-----TTAATCCC
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGMATTAACCCC-----
-ATAGTTAATCCCCCNNA
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGMATTAACCCC----
GATAATTAATCCCTCTT
 C G T A A C T G A C T G G T A C G T C A A C G T A C G T C G T A C T G A G A T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T