Information for 4-TTCCMGKAGSCAS (Motif 5)

A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A T G C A G T C C G A T G T A C A G T C A C G T A C T G A C T G C G T A C T G A
p-value:1e-12
log p-value:-2.945e+01
Information Content per bp:1.868
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 16.5bp
Average Position of motif in Background56.4 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCCMGKAGSCAS
TTCCNGGAAG---
 A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCCMGKAGSCAS
NNCTTCCNGGAAGN--
 A C G T A C G T A C G T A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCCMGKAGSCAS
TTTCCNGGAAAN--
 A C G T A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCCMGKAGSCAS
TTTCCTGGAAA---
 A C G T A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTCCMGKAGSCAS
NNNCTTTCCAGGAAA---
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTCCMGKAGSCAS
TGCCCCCGGGCA-
 A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTCCMGKAGSCAS
NATTTCCNGGAAAT--
 A C G T A C G T A C G T A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCCMGKAGSCAS
TGCCCCAGGGCA-
 A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTCCMGKAGSCAS
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCCMGKAGSCAS
CTTCCGGT------
 A C G T A G C T A C G T A G T C A G T C G T C A A C T G A C T G C G T A C T A G A T C G G T A C C G T A A T C G
A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T