Information for 4-ATTTKCTTCCCTSCTG (Motif 9)

C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G
Reverse Opposite:
A T G C C G T A A T C G A T G C C T G A A C T G C T A G C T A G C G T A C T G A C T A G T G A C C G T A C G T A T C G A A G C T
p-value:1e-12
log p-value:-2.990e+01
Information Content per bp:1.735
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.9 +/- 20.7bp
Average Position of motif in Background37.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:ATTTKCTTCCCTSCTG--
------CCCCCTGCTGTG
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATTTKCTTCCCTSCTG
----NCTTCCCGCCC-
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:ATTTKCTTCCCTSCTG-----
------TCNCCTGCTGNGNNN
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATTTKCTTCCCTSCTG---
----GGCCYCCTGCTGDGH
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ATTTKCTTCCCTSCTG
------TTCCCGCCWG
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ATTTKCTTCCCTSCTG-----
------TNTCCTGCTGTGNNG
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:9
Orientation:forward strand
Alignment:ATTTKCTTCCCTSCTG---
---------CCTGCTGAGH
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATTTKCTTCCCTSCTG
CAGCTGTTTCCT-----
 A C G T C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATTTKCTTCCCTSCTG
----NYTTCCCGCC--
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G
A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ATTTKCTTCCCTSCTG-----
------NNTCCTGCTGTGNNN
 C T G A A C G T G A C T A C G T A C T G A G T C A G C T C G A T A G T C A G T C A G T C A G C T A T C G A T G C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C