Information for 7-CCWKGTAGGGCAA (Motif 6)

A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A G T C A G T C C G A T C G T A A T G C G T A C C G A T A C T G A C T G
p-value:1e-14
log p-value:-3.237e+01
Information Content per bp:1.909
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.9 +/- 20.8bp
Average Position of motif in Background46.3 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCWKGTAGGGCAA----
-NNNNTTGGGCACNNCN
 A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCWKGTAGGGCAA
CCATATATGGNA-
 A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCWKGTAGGGCAA
TTCCATATATGGAA-
 A C G T A C G T A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCWKGTAGGGCAA
--AAYTAGGTCA-
 A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCWKGTAGGGCAA-
----GTTGCGCAAT
 A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCWKGTAGGGCAA-
---NATTGTGCAAT
 A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCWKGTAGGGCAA
----TNNGGGCAG
 A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

SRF/MA0083.3/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCWKGTAGGGCAA
TGNCCATATATGGTCA
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCWKGTAGGGCAA
----NGTGGGCAT
 A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCWKGTAGGGCAA
TATAAGTAGGTCAA
 A C G T A G T C A G T C C G T A A C T G A T C G A C G T C G T A C T A G A C T G A C T G A G T C C G T A C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A