Information for 6-AAGKKCASADTST (Motif 5)

C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
Reverse Opposite:
T C G A T A C G G T C A G A T C C A G T A T C G C A G T C A T G G T C A T G A C A G T C A G C T G A C T
p-value:1e-14
log p-value:-3.314e+01
Information Content per bp:1.567
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.89%
Number of Background Sequences with motif972.9
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets55.1 +/- 28.3bp
Average Position of motif in Background48.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAGKKCASADTST
AAGGTCAC-----
 C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAGKKCASADTST
CAAAGGTCAG-----
 A C G T A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAGKKCASADTST
TCAAGGTCAN-----
 A C G T A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAGKKCASADTST
TRAGGTCA------
 A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AAGKKCASADTST
TCTCAAAGGTCACCTG--
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGKKCASADTST
TCAAGGTCAT-----
 A C G T A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGKKCASADTST
ATCAAGGTCA------
 A C G T A C G T A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAGKKCASADTST
TCTCAAAGGTCACGAG--
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGKKCASADTST
CAAGGHCANV----
 A C G T C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGKKCASADTST---
-AGGTCACCCTGACCT
 C T G A C T G A T C A G A C T G C A G T G T A C G T C A T A G C G T C A C T A G A C G T A T G C A G C T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T