Information for 7-AATAGTTTTK (Motif 20)

G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T
Reverse Opposite:
G T C A C G T A C T G A C G T A C G T A A G T C G A C T C G T A C G A T A C G T
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.799
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif63.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.4 +/- 28.6bp
Average Position of motif in Background51.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AATAGTTTTK---
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AATAGTTTTK---
TAATTGTTCTAAAC
 A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATAGTTTTK
-ATTGTTA--
 G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AATAGTTTTK---
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------AATAGTTTTK----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AATAGTTTTK
CCTTAATNGNTTTT
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AATAGTTTTK--
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AATAGTTTTK
NNATNAATTGTTTNN
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AATAGTTTTK--
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AATAGTTTTK
-ATTGTTTAN
 G T C A C G T A A C G T C T G A A C T G A C G T A C G T G A C T A C G T C A G T
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C