Information for 6-ATCTGGCAAC (Motif 17)

G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
Reverse Opposite:
A C T G G A C T A C G T A T C G A G T C G T A C C T G A A C T G G T C A C A G T
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.861
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif83.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets61.7 +/- 25.8bp
Average Position of motif in Background55.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ATCTGGCAAC
GGTCTGGCAT-
 A C G T G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATCTGGCAAC
-CTTGGCAA-
 G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCTGGCAAC--
SCCTAGCAACAG
 G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATCTGGCAAC
-NTTGGCANN
 G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATCTGGCAAC
--TTGGCA--
 G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCTGGCAAC-
TGTCTGDCACCT
 A C G T G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATCTGGCAAC
ARNTGACA--
 G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATCTGGCAAC
NNTTGGCANN
 G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCTGGCAAC
VGCTGWCAVB
 G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCTGGCAAC
AACATCTGGA---
 A C G T A C G T A C G T G T C A A C G T A G T C A G C T A C T G A C T G A T G C C G T A C T G A A G T C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T