Information for 4-DGTGMCCTCT (Motif 4)

C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T
Reverse Opposite:
C T G A A C T G C T G A A C T G C T A G C A G T G T A C C T G A T G A C G T A C
p-value:1e-19
log p-value:-4.378e+01
Information Content per bp:1.733
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif9.80%
Number of Background Sequences with motif1502.7
Percentage of Background Sequences with motif3.09%
Average Position of motif in Targets52.9 +/- 27.6bp
Average Position of motif in Background50.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---DGTGMCCTCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:DGTGMCCTCT
--TGACCYCT
 C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---DGTGMCCTCT----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:DGTGMCCTCT
--TGACCTYA
 C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--DGTGMCCTCT----
NNNGTGACCTTTGNNN
 A C G T A C G T C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--DGTGMCCTCT-
CNNTTGACCTTTG
 A C G T A C G T C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---DGTGMCCTCT----
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--DGTGMCCTCT----
NNNNTGACCTTTNNNN
 A C G T A C G T C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:DGTGMCCTCT-
-CTGACCTTTG
 C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----DGTGMCCTCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C A T G A C T G A G C T A C T G G T C A A G T C A G T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C