Information for 4-TTTCTTCCTAATTAGC (Motif 6)

A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C C G A T C T G A G T C A A C G T A C G T C G T A A C T G A C T G C G T A C T G A A T C G G T C A C T G A T G C A
p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 22.4bp
Average Position of motif in Background64.9 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0098.1_Lhx8/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTTCTTCCTAATTAGC----
---ACCCCTAATTAGCGGTG
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0089.1_Isx/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTCTTCCTAATTAGC---
---ACTCCTAATTAGTCGT
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PH0097.1_Lhx6_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTCTTCCTAATTAGC----
---TCCACTAATTAGCGGTT
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTCTTCCTAATTAGC---
--CACCGCTAATTAGCGGT
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0034.1_Gbx2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTCTTCCTAATTAGC---
--AANCGCTAATTAGCNNN
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

LHX6/MA0658.1/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TTTCTTCCTAATTAGC
------ACTAATTAGC
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C

PAX4/MA0068.2/Jaspar

Match Rank:7
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTTCTTCCTAATTAGC
-------CTAATTAG-
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTCTTCCTAATTAGC---
--NTTCGCTAATTAGCTNT
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

PH0127.1_Nobox/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTCTTCCTAATTAGC---
--GNTNNCTAATTAGNNCG
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T T A C G C T G A C G A T C G T A T G A C A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A G T C A T C G T A G C A T C G

NOTO/MA0710.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TTTCTTCCTAATTAGC
------NNTAATTAGN
 A C G T A G C T A C G T A T G C A G C T A C G T A G T C A G T C A C G T C G T A T G C A A C G T A G C T C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C