Information for 3-TCAGCACAGAATGTTC (Motif 5)

A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C
Reverse Opposite:
C A T G G T C A C T G A G A T C G C T A C A G T A C G T A T G C C G A T T A C G A C G T A T C G G A T C C G A T A T C G T G C A
p-value:1e-14
log p-value:-3.430e+01
Information Content per bp:1.615
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif271.4
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets46.3 +/- 22.4bp
Average Position of motif in Background51.2 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TCAGCACAGAATGTTC--
---GVACAGNMTGTYCTB
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCAGCACAGAATGTTC--
---GRACAGWMTGTYCTB
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCAGCACAGAATGTTC-
-NAGNACANNNTGTNCT
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TCAGCACAGAATGTTC--
--AGNACAGNCTGTTCTN
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T
A C G T A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCAGCACAGAATGTTC
-AAGAACATWHTGTTC
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCAGCACAGAATGTTC--
-GGGAACACAATGTTCCC
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T
A C G T C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAGCACAGAATGTTC--
-GGGTACATAATGTTCCC
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T
A C G T C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCAGCACAGAATGTTC--
-NGGTACACNGTGTTCCC
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T
A C G T C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCAGCACAGAATGTTC-----
-NNTTCTGGAANNTTCTAGAA
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TCAGCACAGAATGTTC-----
------TAGAANVTTCTAGAA
 A C G T A T G C C G T A C A T G T A G C T G C A A T G C G C T A A T C G T G C A G T C A C G A T C A T G A G C T C A G T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A