Information for 12-GCGCTGGCCCTCAGGT (Motif 24)

A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A T G A C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C G T A C G T C A C T A G G T A C A T C G A G T C
p-value:1e-6
log p-value:-1.482e+01
Information Content per bp:1.909
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.8 +/- 20.0bp
Average Position of motif in Background30.9 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGCTGGCCCTCAGGT
--NCTGTCAATCAN--
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGCTGGCCCTCAGGT
--SCTGTCAVTCAV--
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCGCTGGCCCTCAGGT
----ATGCCCTGAGGC
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCGCTGGCCCTCAGGT--
----NTGCCCANNGGTNA
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCGCTGGCCCTCAGGT
-GSCTGTCACTCA---
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCGCTGGCCCTCAGGT
----WTGSCCTSAGGS
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCGCTGGCCCTCAGGT
--GCTCGGSCTC----
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCGCTGGCCCTCAGGT
GGGCGGGACC------
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCGCTGGCCCTCAGGT-
--GCTGACCTTGAACTN
 A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGGCCCTCAGGT
TGCGCAGGCGC------
 A C G T A C T G T A G C A C T G A G T C A C G T A C T G A C T G G T A C A G T C G T A C A C G T A G T C C G T A A C T G A C T G A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T