Information for 12-ATTCAKAGCYKRA (Motif 19)

G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
Reverse Opposite:
A C G T A G T C G T A C C T G A A C T G A G T C A C G T G T C A A C G T A C T G C G T A C G T A A C G T
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 30.7bp
Average Position of motif in Background52.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTCAKAGCYKRA
ACATTCATGACACG-
 A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATTCAKAGCYKRA
GACCACATTCATACAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATTCAKAGCYKRA
NTGATTTATGGCC---
 A C G T A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAKAGCYKRA
TGATTTATGGCC---
 A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAKAGCYKRA
TGATTTATGGCC---
 A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTCAKAGCYKRA
GCTATTTATAGC----
 A C G T A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTCAKAGCYKRA
AAATCACTGC----
 A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTCAKAGCYKRA
AAATCACAGCA---
 A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATTCAKAGCYKRA
TCTATTTATAGN----
 A C G T A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATTCAKAGCYKRA
TCTATTTTTAGA----
 A C G T A C G T A C G T G T C A A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G C T C A T G C T A G C G T A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T A C G T