Information for 10-CMAAGGAACACATGTG (Motif 15)

G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
Reverse Opposite:
A G T C C G T A A G T C G C T A A G C T A T C G A C G T C A T G C A G T C A G T A G T C G T A C C G A T A G C T A C G T A C T G
p-value:1e-10
log p-value:-2.352e+01
Information Content per bp:1.683
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif47.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets51.2 +/- 24.3bp
Average Position of motif in Background45.9 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CMAAGGAACACATGTG
-CCAGGAACAG-----
 G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CMAAGGAACACATGTG
---TGGAAAA------
 G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CMAAGGAACACATGTG----
NANTGGAAAAANTGAGTCAN
 G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CMAAGGAACACATGTG--
--------NACATATGGN
 G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CMAAGGAACACATGTG
AACAAAGG----------
 A C G T A C G T G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CMAAGGAACACATGTG
TATAGATCAAAGGAAAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CMAAGGAACACATGTG
-AGAGGAA--------
 G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CMAAGGAACACATGTG
------AACACGTGTT
 G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CMAAGGAACACATGTG
NNATAAGGNN--------
 A C G T A C G T G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CMAAGGAACACATGTG-
-CGAAGCACACAAAATA
 G T A C T G C A C T G A C G T A C A T G A C T G G T C A G T C A G T A C C G T A T A G C C T G A C A G T T C A G C G A T T C A G A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A