Information for 5-GAAGGGAACTKCA (Motif 9)

A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G T G C A C T G A A T C G C G A T A C G T A G T C A G T C A G T C A C G T A C G T G T A C
p-value:1e-12
log p-value:-2.935e+01
Information Content per bp:1.792
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.5 +/- 24.7bp
Average Position of motif in Background53.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAAGGGAACTKCA
---TGGAACAGMA
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAAGGGAACTKCA
---GGAAATTCCC
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAAGGGAACTKCA-
-----AAACCGCAA
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGGGAACTKCA-----
-AATCGCACTGCATTCCG
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAAGGGAACTKCA--
---GGGAATTGTAGT
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GAAGGGAACTKCA
TGGCCANNNNNGGAACTGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAAGGGAACTKCA
---GGGAATTTCC
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAAGGGAACTKCA
---GGAAANCCCC
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAAGGGAACTKCA
CWGGCGGGAA-----
 A C G T A C G T A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAAGGGAACTKCA--
-----AAACCGCAAA
 A C T G T G C A G T C A A C T G C T A G C T A G C G T A C G T A A T G C A G C T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A