Information for 3-TGDCAYTTTTGKC (Motif 3)

C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C
Reverse Opposite:
A C T G T G A C A T G C G T C A T G C A T C G A C G T A T C G A A C G T A C T G G C A T A T G C C G T A
p-value:1e-19
log p-value:-4.564e+01
Information Content per bp:1.567
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif10.72%
Number of Background Sequences with motif1718.2
Percentage of Background Sequences with motif3.53%
Average Position of motif in Targets44.8 +/- 23.6bp
Average Position of motif in Background50.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.69
Offset:8
Orientation:forward strand
Alignment:TGDCAYTTTTGKC-
--------TTGGCA
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:TGDCAYTTTTGKC---
-------NTTGGCANN
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TGDCAYTTTTGKC---
------NNTTGGCANN
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGDCAYTTTTGKC
-----CCWTTGTY
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGDCAYTTTTGKC
AGGVNCCTTTGT-
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGDCAYTTTTGKC--
-----CCTTTGTTTT
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGDCAYTTTTGKC--
-----CCATTGTTNY
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGDCAYTTTTGKC--
-------CTTGGCAA
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGDCAYTTTTGKC--
-----CCWTTGTYYB
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGDCAYTTTTGKC
------CTTTGT-
 C G A T T A C G C G T A T G A C T G C A A G C T G C A T A G C T A C G T C A G T A T C G A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T