Information for 9-AGTATCTAAA (Motif 16)

C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.2 +/- 17.0bp
Average Position of motif in Background21.6 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGTATCTAAA--
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGTATCTAAA---
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTATCTAAA--
AATATGCAAATT
 C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTATCTAAA-
--TATGCAAAT
 C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTATCTAAA-----
CGTATCGAAACCAAA
 C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0105.1_Arid3a_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTATCTAAA--
ACCCGTATCAAATTT
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTATCTAAA
AATGTATCAAT-
 A C G T A C G T C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTATCTAAA--------
GAAGTANCACGAATNMRAGT
 A C G T A C G T C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTATCTAAA---
--TATGTAAATAT
 C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTATCTAAA---
NNNGTAACTANGNNA
 A C G T A C G T C G T A A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A