Information for 12-CAGCTGCTTGCAG (Motif 15)

A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A T G C C G T A C T G A A C T G A G T C C G T A A C T G A G T C C G A T A C T G
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.4 +/- 19.2bp
Average Position of motif in Background45.8 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCTTGCAG
AGCAGCTGCT-----
 A C G T A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGCTGCTTGCAG
CAGCTGNT-----
 A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAGCTGCTTGCAG
NNVVCAGCTGBN-----
 A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGCTTGCAG
GCAGCTGTNN----
 A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CAGCTGCTTGCAG
NNAGCAGCTGCT-----
 A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCTTGCAG
NCAGCTGCTG----
 A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCTTGCAG
CGCAGCTGCG-----
 A C G T A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCTTGCAG
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCTTGCAG
ACAGCTGTTN----
 A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCTGCTTGCAG
NGNGACAGCTGCN-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C A C G T A C T G A G T C A G C T A C G T A T C G A T G C C G T A A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T