Information for 10-ACTGGGTGGCTTT (Motif 13)

C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A G T C A C A T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A A T C G A C G T
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets21.0 +/- 7.0bp
Average Position of motif in Background64.4 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACTGGGTGGCTTT--
GTATTGGGTGGGTAATT
 A C G T A C G T C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTGGGTGGCTTT
CGTGGGTGGTCC-
 C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACTGGGTGGCTTT--
NGTAGGTTGGCATNNN
 A C G T C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ACTGGGTGGCTTT
-----GTGGAT--
 C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACTGGGTGGCTTT
CTTGAGTGGCT--
 C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACTGGGTGGCTTT
---GGTTGGCAT-
 C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACTGGGTGGCTTT
NGCGTGGGCGGR---
 A C G T A C G T C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACTGGGTGGCTTT-
--NNTGTGGATTSS
 C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACTGGGTGGCTTT
--NNTGTGGTTT-
 C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTGGGTGGCTTT-
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T C G T A T A G C A C G T A C T G A C T G A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T