Information for 6-GCTTGCTCTAGTT (Motif 6)

A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G C T C G T A A C T G C G T A A C T G G T A C C G T A C G T A C T A G A T G C
p-value:1e-13
log p-value:-3.191e+01
Information Content per bp:1.929
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.5 +/- 21.5bp
Average Position of motif in Background43.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTTGCTCTAGTT------
--GAAAACTAGTTAACATC
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTTGCTCTAGTT
---TGACCTARTT
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTTGCTCTAGTT--
BCNGGTTCTAGANCN
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTTGCTCTAGTT---
--TTGACCTANTTATN
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTTGCTCTAGTT--
---GGCTCYAKCAYC
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCTTGCTCTAGTT---
------ACTAGTTAAC
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTTGCTCTAGTT---
CTAAGGTTCTAGATCAC
 A C G T A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCTTGCTCTAGTT--
-------CTAATTAA
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTTGCTCTAGTT
--TTCCTCT----
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T
A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCTTGCTCTAGTT
-----CACTAATT
 A T C G A G T C A C G T A C G T A C T G A G T C A C G T A G T C A C G T C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T