Information for 1-STGGGKCAAAGGT (Motif 2)

T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T
Reverse Opposite:
T C G A G A T C G A T C A G C T A G C T C G A T T A C G G T C A A G T C G A T C G A T C T C G A A T C G
p-value:1e-46
log p-value:-1.076e+02
Information Content per bp:1.625
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif10.93%
Number of Background Sequences with motif787.7
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets51.6 +/- 23.2bp
Average Position of motif in Background49.3 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
GTAGGGCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:STGGGKCAAAGGT--
-TGGGGCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.84
Offset:1
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
-TAGGGCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
AGGGGTCAGAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
-GAGGTCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.77
Offset:1
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
-GAGGTCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.77
Offset:1
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
-GGGGTCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.77
Offset:1
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
-GGGGTCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.76
Offset:1
Orientation:forward strand
Alignment:STGGGKCAAAGGT--
-GGGGTCAAAGGTCA
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:STGGGKCAAAGGT----
AAAGGTCAAAGGTCAAC
 T A G C A G C T C T A G C T A G C T A G C A G T A T G C C G T A C T G A C T G A C T A G C T A G A G C T A C G T A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C