Information for 16-VCATTGTTCCTGG (Motif 18)

T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
Reverse Opposite:
A T G C G T A C C G T A C T A G A C T G C T G A C T G A A G T C C G T A C G T A C G A T A C T G A T C G
p-value:1e-10
log p-value:-2.335e+01
Information Content per bp:1.844
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.6 +/- 20.1bp
Average Position of motif in Background52.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:VCATTGTTCCTGG
YCTTTGTTCC---
 T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-VCATTGTTCCTGG
NCCATTGTTC----
 A C G T T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:VCATTGTTCCTGG
CCWTTGTYYB---
 T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:VCATTGTTCCTGG
CCATTGTTYB---
 T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:VCATTGTTCCTGG
CCATTGTTTT---
 T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----VCATTGTTCCTGG
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:VCATTGTTCCTGG
CCATTGTTNY---
 T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-VCATTGTTCCTGG
NCCATTGTTY----
 A C G T T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:VCATTGTTCCTGG
CCATTGTTC----
 T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----VCATTGTTCCTGG
ANNTCCATTGTTCNNN-
 A C G T A C G T A C G T A C G T T A G C G T A C C G T A A C G T A C G T A C T G A G C T A G C T G T A C A G T C A C G T A C T G A T C G
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T