Information for 14-SCAAAACMTGYCM (Motif 16)

A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C
Reverse Opposite:
A C T G A T C G C T G A T A G C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G A T C G
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.867
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.3 +/- 23.3bp
Average Position of motif in Background57.3 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:SCAAAACMTGYCM-
GCAAAACATTACTA
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----SCAAAACMTGYCM
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SCAAAACMTGYCM
---NCACCTGTN-
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---SCAAAACMTGYCM
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SCAAAACMTGYCM----
-AATTACCTGTCAATAC
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SCAAAACMTGYCM----
-AAAGACCTGTCAATAC
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C A C G T A C G T A C G T A C G T
A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

CLOCK/MA0819.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:SCAAAACMTGYCM
--AACACGTGTT-
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C
A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:SCAAAACMTGYCM-
--AAAACCGGTTTT
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C A C G T
A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SCAAAACMTGYCM
--TACACCTGTC-
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C
A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:SCAAAACMTGYCM--
GAAAAAATTGCAAGG
 A T G C A G T C G T C A C G T A C G T A C G T A A G T C G T C A A C G T A C T G A G C T A T G C G T A C A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G