Information for 21-CTCTCTCTCTCTC (Motif 35)

A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
Reverse Opposite:
C T A G C T G A C T A G C G T A T C A G C G T A C T A G C T G A T C A G C T G A T C A G C T G A C T A G
p-value:1e-4
log p-value:-1.065e+01
Information Content per bp:1.748
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif56.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.2 +/- 21.4bp
Average Position of motif in Background48.2 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCTCTC
TCACTTTCACTTTCN-
 A C G T A C G T A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTCTC
ACTTTCACTTTC--
 A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCTC
ACTTTCACTTTC--
 A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTCTCTCTCTCTC---
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCTC
ASTTTCASTTYC--
 A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTCTC
AGTTTCAGTTTC--
 A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CTCTCTCTCTCTC
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCTCTCTC
ACCACTCTCGGTCAC
 A C G T A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCTCTCTCTCTC--
--CTGTCTGTCACCT
 A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCTC
RSTTTCRSTTTC--
 A C G T A G T C G A C T A G T C G A C T A G T C G A C T A G T C C G A T A G T C G A C T A G T C G A C T A G T C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T